University of California, San Diego
Summer 2004, Research Experience for Undergraduates
Faculty Mentor Project Descriptions
Observational Astrophysics
Professor David Tytler:
Our
group works in observational cosmology. Our main program is the
measurement of the amount of vacuum (dark) energy in the universe,
using a geometrical method. We use the world’s largest telescope, the
Keck 10-m telescopes in Hawaii, and the Lick 3-m in Santa Cruz, CA, to
obtain spectra of quasars, which are giant black holes in distant
galaxies. The spectra contain absorption lines, which describe the
amount of matter in the universe and its distribution. Most matter in
the space between galaxies is called the intergalactic medium. The
Hydrogen in this gas causes strong absorption in quasar spectra. The
amount of absorption tells us the amount of gas, its ionization, and
temperature, while the distribution along the lines of sight to the
quasars tells us the amplitude of the primordial perturbations in the
distribution of matter. These perturbations arose at the end of
inflation, and gravity causes them to grow in amplitude over time. We
use highly sophisticated analyses to measure the amount of structure in
the universe both along individual lines of sight, and in between
adjacent lines of sight, in the plane of the sky. We are simultaneously
working to obtain the best physical description of the intergalactic
medium, by comparing numerical simulations from the San Diego
supercomputer with the best observational measurements. We have
sponsored REU students for each of the last 4 years. Those from earlier
years are now all in strong graduate Physics/Astronomy programs. We
have developed various tools, which allow our summer students to work
on projects that should lead to significant publications. In the summer
of 2003 our group contained three summer students (one from REU), 4
graduate students, one staff researcher and two full professors. Two of
the summer students are continuing to work with us through the year.
Biochemistry/Physics
Professor Nguyen-Huu Xuong:
A summer REU student would be involved in a project dealing with the building of a new automatic detector for Cryo-Electron Microscopy. This is a new and exciting project that would allow the determination of 3D structure protein complex without the need to grow large crystals. A good background in electronic or computer programming is preferred.
Biophysics
Professor David Kleinfeld:
We are interested in sensorimotor aspects of brain function--in particular the algorithm used by animals to extract a stable picture of the world based on input through their actively moving sensors and sense organs. A variety of experimental approaches, which involve trained rats, direct electrical measurements, optical based measurements, and advanced signal analysis, are brought to bear on this issue. Other research interests include nonlinear optics and the application of nonlinear optics to cortical blood flow and neural function.
Professor Jose Onuchic:
Website address: <http://ctbp.ucsd.edu> Prof. Onuchic’s personal research interests are: Theoretical and computational methods for molecular biophysics and chemical reactions in condensed matter. In protein folding, we introduced the concept of protein folding funnels as a mechanism for the folding of small fast folding proteins. Convergent kinetic pathways, or folding funnels, guide folding to a unique, stable, native conformation. Energy landscape theory and the funnel concept provide the theoretical framework needed both to pose and to address the questions of protein folding mechanisms. Connections between our theoretical advances and experiments are central for the development of this new view for protein folding. A second effort of our group focuses on the theory of chemical reactions in condensed matter with emphasis on biological electron transfer reactions. These reactions are central to the bioenergetic pathways of both animals and plants on earth, such as the early steps of photosynthesis.
Dr. Peter Wolynes:Elementary Particles and
Quantum Field Theory
Professor George Fuller:
An
REU student working with my group would likely be involved with our
effort to understand the neutrino physics/astrophysics of the early
universe and stellar collapse. For example, we are trying to understand
how lepton number could be generated from neutrino oscillations in the
early universe. This work is likely to be numerically intensive. C and
Fortran programming skills are desirable, but not required, as these
can be learned "on the job."
Professors Vivek Sharma and James Branson:
The UCSD Elementary Particle Physics group is developing a Data Acquisition system for the very high energy, high luminosity Large Hadron Collider. We are testing systems that will enable us to build events at a data rate of up to 100 GBytes per second. After the events are built we must reduce the rate of data to be stored to just 100 MByte per second. To make this reduction, trigger algorithms must be developed. This final step of the trigger will take place in a large "farm" of standard computers (about 4 TIPS). We are looking for students interested in either the hardware development or the Higher Level Trigger event selection development. The LHC should finally tell us about the origin of mass and the spontaneous breaking of symmetries in the vacuum. It may also find other interesting phenomena such as supersymmetry or quantum gravity effects..
Experimental and Theory Condensed Matter Physics
Professor Dimitri Bassov:
Our research involves infrared spectroscopy of novel materials which exhibit exotic electronic properties. One of the possible projects is devoted to the study of high-Tc superconductors using infrared methods. This includes taking measurements of the low-temperature reflectance of (Y-Pr)BaCuO microcrystals using state-of-the-art Fourier-transform interfermoeter, and analysis of the results. Another project involves construction of a set-up for grazing incidence infrared reflectometry. This apparatus will be used for the survey of the anisotropy of the electronic transport in novel superconducting and magnetic materials.
Professor Michael Fogler:
Our
research is focused on a theoretical understanding of low-dimensional
Electron systems and nanostructures. In particular, we study how strong
Coulomb interactions, disorder, and quantum effects conspire to create
highly correlated phases of matter with unusual properties. REU
students are desired for assistance with two projects. One is devoted
to novel electron liquid crystals that exist at low
temperatures in ultra-pure semiconductor heterostructures. Depending on
student's interests, the activities may range from directed reading and
website design to numerical simulations to analytical theoretical work.
The other project is centered on electronic properties of carbon
nanotubes. We are interested in exploring, analytically and
numerically, how charge and spin degrees of freedom behave on
microscopic level and how this may affect performance of miniature
nanotube-based devices. Further information will soon be posted at <http://physics.ucsd.edu/~fogler/>.
Professor Frances Hellman:
The
exact project will be arrived at depending on interest and expertise of
the student, but will be in the general area of research on novel
magnetic materials, and in particular on the effects of magnetic
moments on electrical transport. A potential project is to investigate
the effects of introducing magnetic moments, such as associated with
the rare earth elements, into a semiconducting matrix, using different
geometries (an alloy versus a multilayer for example). We know
from previous work that the effects on both the electrical transport
and the magnetic properties are very large. The student will be
involved in the preparation, characterization or measurements of these
materials, using, for example, an ultra-high vacuum multi-source
deposition system, various magnetometers for magnetic measurements,
and/or a conductivity and magnetoresistance measurement apparatus.
Professor Brian Maple:
Our
group performs experimental investigations of superconductivity,
magnetism, and the interplay of these two phenomena. We are
especially interested in novel types of superconductivity that occur
within, or in the vicinity of, magnetic phases and appear to be
produced by magnetic interactions, in contrast to conventional
superconductivity that arises from the electron phonon
interaction. In this project, single crystal specimens of copper
oxide and rare earth intermetallic compounds that display novel types
of superconductivity will be prepared and characterized.
Superconductivity, magnetism, and other phenomena exhibited by these
materials will be studied by means of electrical resistivity, magnetic
susceptibility, and specific heat measurements at low temperatures, at
high pressures and in high magnetic fields.
Professor Ivan Schuller:
Our
group is involved in a variety of problems in complex materials in
reduced dimensionality. We are trying to bridge the gap between the
three dimensional infinite solid and the atoms. This is a largely
unexplored area in solid state physics, in which much of the current
solid state activity concentrates. The type of phenomena explored
include high and low temperature superconductivity and magnetism in a
variety of configurations. This is done by using a large number of
sophisticated materials preparation, state of the art vacuum and
lithographic techniques, combined with sophisticated structural
determination probes and a variety of physical property measurements
such as magnetotransport, photoconductivity, magnetic and thermodynamic
measurements in a wide range of temperature and magnetic field. Many of
the above mentioned techniques are directly applicable in industrial
processes. For further information please access http://ischuller.ucsd.edu.
Professor Lu Sham:
Possibly one summer
student, working with a group on numerical simulation of quantum
operations for quantum computation or information processing in a
system of semiconductor quantum dots or on spintronics
Web page physics.ucsd.edu/~ljssst/ljs.html
Low Temperature Experimental Research
Professor John Goodkind:
We are currently engaged in the fabrication and testing of "quantum
bits" that we hope, eventually, to use in a "quantum computer".
Classical bits can be placed either in a 1 or 0 state and logical
operations on them lead to computational results expressed as a
collection of 1's and 0's for bits in the computer memory. A quantum
bit can be placed in a superposition of 1 and 0 states and the output
of computations would similarly be a collection of bits in
superposition states. In this manner, a quantum computer is
capable of effectively performing multiple computations in parallel.
Attempts to realize physical systems, in which individual quantum bits
can be addressed and manipulated, are relatively new and there is
considerable interest in several such systems. Ours is one of the
newest and most promising systems. We are using electrons on the
surface of a liquid helium film. Individual electrons will be trapped
over an electrode located 0.5 micrometers below the surface of the
film. The first two energy levels of the electron for motions
perpendicular to the surface are the quantum states that we use. We are
using the full array of nanofabrication techniques available for state
of the art work. We have fabricated and have begun testing the systems
required to trap the electrons, to recharge the traps at low
temperatures, to detect
single electrons when they are released from the trap and to use all of
this to measure the quantum states of individual electrons.
Non-Linear
Dynamics
Professor Henry Abarbanel:
We conduct research into the nonlinear dynamics of physical and biological systems including communication using chaotic transmitters and receivers. We are also investigating fundamental issues associated with classification and prediction in high dimensional systems, such as the lasers we use in communications. We also have an active effort in computational and laboratory neuroscience. We model individual and small networks of neurons, numerically and in analog circuits. We are exploring information flow in neural networks with application to the design of biological systems. Our experimental and modeling efforts work with crustaceans, cortex from mamallian brains, and the visual system of flies. In collaboration with other laboratories we study learning and memory in birdsong and the dynamics of invertabrate olfaction.
Experimental
and Theory Plasmas and Fluids
Professors C. Fred
Driscoll and Dan Dubin:
We are investigating the
basic phenomena of vortices, turbulence, and weak viscosity in
near-ideal 2-dimensional fluids, using magnetized electron plasmas as
the "working fluid". An ion plasma apparatus with laser-cooling extends
this work into the cryogenic high viscosity regime. See more
information at http://sdphA2.ucsd.edu. Recent experiments
discovered unusual "vortex crystal" states which form when intense
vortices anneal into a lattice due to interactions with a weak
background of vorticity. Analytical theory and vortex-in-cell computer
simulations have clarified the dynamical processes involved. Other
experiments have measured the weak viscosity that arises from
long-range collisions between individual electrons, for comparison to
analytic theory which includes the finite size of the system.
Experimentally-oriented students will take data on an electron plasma
apparatus with extensive electronics and computer-based diagnostics.
Theoretically-oriented students will run (or develop new) simulations
investigating the subtleties of collisional processes in sheared fluids.